PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT25190
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family Nin-like
Protein Properties Length: 944aa    MW: 103467 Da    PI: 6.0724
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT25190genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.34.9e-26583645152
    RWP-RK   1 aekeisledlskyFslpikdAAkeLg...........vclTvLKriCRqyGIkRWPhRkiksl 52 
               aek+isle+l++yFs+++k+AAk+Lg           +c+T++KriCRq+GI+RWP+Rki+++
  EMT25190 583 AEKTISLEVLQQYFSGSLKNAAKSLGglkwqqnvaacMCPTTMKRICRQHGISRWPSRKINKV 645
               589**********************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151914.845573665IPR003035RWP-RK domain
PfamPF020422.5E-23586645IPR003035RWP-RK domain
SuperFamilySSF542775.23E-22841934No hitNo description
PROSITE profilePS5174519.189850932IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.2E-25850931No hitNo description
SMARTSM006662.2E-24850932IPR000270PB1 domain
PfamPF005645.9E-15850931IPR000270PB1 domain
CDDcd064071.03E-33851931No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0010118Biological Processstomatal movement
GO:0010167Biological Processresponse to nitrate
GO:0042128Biological Processnitrate assimilation
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 944 aa     Download sequence    Send to blast
MDIDPSSVSH ADGGGDLWPF DSLTTSLFFS SVSSSPPLHP LPVASSSWLT PPSPLWLFED  60
RQMMPIEVGP APAATPDNTA AVAEEAQRAR SGNSDTPVKK TERLTNKWQF NLALHDDSTN  120
SSCLFKEKLT HALRYFKEST DQHLLVQVWA PVKSGDRYVL TTSGQPFVLD HQSIGLLQYR  180
AVSMMYMFSV DGDNAGELGL PGRVYKQKVP EWTPNVQYYS STEYPRLNHA ISYNVHGTVA  240
LPVFDPSVQS CIAVVELIMT SKKINYADEV DKVCKALEAV NLKSTEILEH PNVQICNEGR  300
QSALVEILEI LTVVCEEHKL PLAQTWVPCK YRSVLAHGGG VKKSCLSFDG SCMGEVCMST  360
SDVAFHVIDA HMWGFRDACV EHHLQKGQGV SGKAFIYHRP CFSKDISQFC KLEYPLVHYA  420
RMFGLAGCFA ICLQSPYTGD DYYMLEFFLP PSCKEEDDQN ALLESILGLI NQCLRNLKVA  480
GNGESNEASL QLSNVIMIES EDFKTNVHFE NSEGFRESPE GDTHGGAHEF DKANSKVSEG  540
HLLADDNSQN NGVSVSRPNG SAASDSSLLH KNGKPPERRR GKAEKTISLE VLQQYFSGSL  600
KNAAKSLGGL KWQQNVAACM CPTTMKRICR QHGISRWPSR KINKVNRSLS KLKQVIESVQ  660
GSDAAFNLTS ITGPLPTIPV GPSSDSFNKE KASESKAEHS NRAVDGDRDS SLQKSQENGS  720
HFGALMSQQG FADTGNNVQL EADKASLSRS SSGEGSINSR TSEGSCQGSP ANQTFVCQPI  780
ASMFLEPQEP QLNPEGFTKE PFQEPELPLS RMLIEDSGSS KDLKNLFGSA IGQPMLAPPS  840
NFGPMRNSGT VTIKASFKED IVRFRFPCSS SVMALKDEVA KRLRMDAGMF DIKYLDDDHE  900
WVKLACNADL EECIEISRHS GTHVIRLLVS DVAAHIGSSC GSSG
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00449DAPTransfer from AT4G24020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003565547.10.0PREDICTED: protein NLP3
SwissprotQ5NB820.0NLP3_ORYSJ; Protein NLP3
TrEMBLM8BJK90.0M8BJK9_AEGTA; Uncharacterized protein
STRINGBRADI2G08177.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47783660
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.10.0Nin-like family protein